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BaseInfo

ncRNA ID	novel_zma_miR9634
Species	Zea mays
Class	miRNA
Genome position	Chr4:17664017-17664059 [-]
Reference genome	RefGen_v4
Source	SRR1997865
Length	21
Mature sequence(if miRNA)	1 - UUUGACUAGGAACGGAUUUAA - 21
Stem-loop(if miRNA)	--      C      C G  U   AAAUCC UUUCUA U AA A   |||||| |||||| | || A   UUUAGG AAGGAU A UU U AA      C      C G  U
Stem-loop sequence	AAAUCCCUUUCUACUGAAUAAUUUUGACUAGGAACGGAUUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008670947.1	ncRNA:21   AAUUUAGGCAAGGAUCAGUUU   1   ||||||||*|||||||||||| targets:610   UUAAAUCCCUUCCUAGUCAAA   630 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103646219 (LOC103646219), mRNA	NA	coding protein	psRNATarget
AY109329.1	ncRNA:21   AAUUUAGGCAAGGAUCAGUUU   1   |||||||=*|||||||||||| targets:393   UUAAAUCUCUUCCUAGUCAAA   413 Target Full Sequence	2.5	Zea mays CL1979_1 mRNA sequence	NA	coding protein	psRNATarget
S78780.1	ncRNA:21   AAUUUAGGCAAGGAUCAGUUU   1   |||||||=*|||||||||||| targets:393   UUAAAUCUCUUCCUAGUCAAA   413 Target Full Sequence	2.5	(gamma-zeinA)=opaque2 modifier {5' region} [Zea mays=maize, Tuxpeno CMS 450, mRNA Partial, 1889 nt]	NA	coding protein	psRNATarget
BT069231.2	ncRNA:21   AAUUUAGGCAAGGAUCAGUUU   1   |||||||=*|||||||||||| targets:1015   UUAAAUCUCUUCCUAGUCAAA   1035 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0366D18 mRNA, complete cds	NA	coding protein	psRNATarget
EU969306.1	ncRNA:21   AAUUUAGGCAAGGAUCAGUUU   1   **||*|||||||||||*|||| targets:3   CGAAUUCCGUUCCUAGGCAAA   23 Target Full Sequence	2.5	Zea mays clone 328279 USP family protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157578.1	ncRNA:21   AAUUUAGGCAAGGAUCAGUUU   1   **||*|||||||||||*|||| targets:3   CGAAUUCCGUUCCUAGGCAAA   23 Target Full Sequence	2.5	Zea mays uncharacterized LOC100284683 (pco067622), mRNA	NA	coding protein	psRNATarget