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BaseInfo

ncRNA ID novel_zma_miR9632
Species Zea mays
Class miRNA
Genome position Chr1:45161070-45161137 [+]
Reference genome RefGen_v4
Source SRR4237225
Length 23
Mature sequence(if miRNA) 46 - CACUGUAGACUGUCCGGUGCGCA - 68
Stem-loop(if miRNA) --CU          -    U    G         G
    CACCGGACAG CUAC GUGC CUGUCCGGU U
    |||||||||| |||| |||| |||||||||
    GUGGCCUGUC GAUG CACG GACAGGCCA G
ACGC          A    U    -         C
Stem-loop sequence CUCACCGGACAGCUACUGUGCGCUGUCCGGUGUGCACCGGACAGGCACUGUAGACUGUCCGGUGCGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT016820.1
ncRNA:23   ACGCGUGGCCUGUCAGAUGUCAC   1
  *|||||||||||||*||||||||
targets:153   GGCGCACCGGACAGGCUACAGUG   175

1.5 Zea mays clone Contig653 mRNA sequence NA coding protein psRNATarget
EU970212.1
ncRNA:23   ACGCGUGGCCUGUCAGAUGUCAC   1
  *||||||||||||||||||||**
targets:612   GGCGCACCGGACAGUCUACAGGA   634

2.5 Zea mays clone 342257 hypothetical protein mRNA, complete cds NA coding protein psRNATarget