ncRNA ID | novel_zma_miR9632 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:45161070-45161137 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237225 |
Length | 23 |
Mature sequence(if miRNA) | 46 - CACUGUAGACUGUCCGGUGCGCA - 68 |
Stem-loop(if miRNA) |
--CU          -    U    G         G     CACCGGACAG CUAC GUGC CUGUCCGGU U     |||||||||| |||| |||| |||||||||     GUGGCCUGUC GAUG CACG GACAGGCCA G ACGC          A    U    -         C |
Stem-loop sequence | CUCACCGGACAGCUACUGUGCGCUGUCCGGUGUGCACCGGACAGGCACUGUAGACUGUCCGGUGCGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT016820.1 |
|
1.5 | Zea mays clone Contig653 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU970212.1 |
|
2.5 | Zea mays clone 342257 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |