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BaseInfo

ncRNA ID novel_zma_miR9626
Species Zea mays
Class miRNA
Genome position Chr1:279985223-279985302 [-]
Reference genome RefGen_v4
Source SRR4237225
Length 21
Mature sequence(if miRNA) 60 - CAAUCCAUGUGUCUUGAAGUG - 80
Stem-loop(if miRNA) --            C   A    GA   AC   A      
  CAAUCCAUGUGU UUG AGUG  UUG  GUG AAUUUAA
  |||||||||||| ||| ||||  |||  ||| ||||||A
  GUUAGGUACACG AAC UCAC  AAC  CAC UUAAAUC
GA            U   C    AC   -C   C      
Stem-loop sequence CAAUCCAUGUGUCUUGAAGUGGAUUGACGUGAAAUUUAAACUAAAUUCCACCCAACACACUCCAAUGCACAUGGAUUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU955601.1
ncRNA:21   GUGAAGUUCUGUGUACCUAAC   1
  ||||*|||*||||||||||||
targets:520   CACUCCAACACACAUGGAUUG   540

2.5 Zea mays clone 1539227 mRNA sequence NA coding protein psRNATarget
XM_020548767.1
ncRNA:21   GUGAAGUUCUGUGUACCUAAC   1
  =|=||||*||||||||||||*
targets:1483   UAUUUCAUGACACAUGGAUUA   1503

3.0 PREDICTED: Zea mays altered inheritance rate of mitochondria protein 25 (LOC103645991), mRNA NA coding protein psRNATarget