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BaseInfo

ncRNA ID novel_zma_miR9608
Species Zea mays
Class miRNA
Genome position Chr9:132268791-132268850 [-]
Reference genome RefGen_v4
Source SRR4237225
Length 24
Mature sequence(if miRNA) 37 - AGUUAAAUGGCUACUCUGUUGGAG - 60
Stem-loop(if miRNA) --        ---       CU  UGGAG   UA
  AGUUAAAU   GGCUACU  GU     AGC  U
  ||||||||   |||||||  ||     |||
  UCGAUUUA   UCGAUGA  CA     UCG  U
GU        AAA       AU  -----   UA
Stem-loop sequence AGUUAAAUGGCUACUCUGUUGGAGAGCUAUUAUGCUACUAAGUAGCUAAAAUUUAGCUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020553457.1
ncRNA:24   GAGGUUGUCUCAUCGGUAAAUUGA   1
  |||||||||||||||=||||||||
targets:1126   CUCCAACAGAGUAGCUAUUUAACU   1149

1.5 PREDICTED: Zea mays uncharacterized LOC100381623 (LOC100381623), transcript variant X1, mRNA NA coding protein psRNATarget