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BaseInfo

ncRNA ID novel_zma_miR9603
Species Zea mays
Class miRNA
Genome position Chr1:261923368-261923427 [+]
Reference genome RefGen_v4
Source SRR4237225
Length 21
Mature sequence(if miRNA) 1 - ACGCACUAACCACUUCAACCC - 21
Stem-loop(if miRNA) --            C         UCAACA
  ACGCACUAACCA UUCAACCCA      U
  |||||||||||| |||||||||
  UGCGUGAUUGGU AAGUUGGGU      A
CU            U         UUUCAA
Stem-loop sequence ACGCACUAACCACUUCAACCCAUCAACAUAAACUUUUGGGUUGAAUUGGUUAGUGCGUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008676323.2
ncRNA:21   CCCAACUUCACCAAUCACGCA   1
  ||||||||*||||||||||||
targets:351   GGGUUGAAUUGGUUAGUGCGU   371

1.5 PREDICTED: Zea mays cytosolic sulfotransferase 12-like (LOC103650751), mRNA NA coding protein psRNATarget
EU952216.1
ncRNA:21   CCCAACUUCACCAAUCACGCA   1
  ||||||=|*||||||||||||
targets:722   GGGUUGGACUGGUUAGUGCGU   742

2.5 Zea mays clone 1228470 mRNA sequence NA coding protein psRNATarget