Search result

BaseInfo

ncRNA ID novel_zma_miR9602
Species Zea mays
Class miRNA
Genome position Chr10:91067932-91067992 [-]
Reference genome RefGen_v4
Source SRR4237225
Length 24
Mature sequence(if miRNA) 1 - ACAAAGUCUGCUUUGCCGAGUGCC - 24
Stem-loop(if miRNA) --               U     CC     
  CGCUCGGCAAAGCAG CUUUG  GAGUGC
  ||||||||||||||| |||||  |||||G
  GUGAGCCGUUUCGUC GAAAC  CUCGCG
CC               U     AA     
Stem-loop sequence CGCUCGGCAAAGCAGUCUUUGCCGAGUGCGGCGCUCAACAAAGUCUGCUUUGCCGAGUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT067215.1
ncRNA:24   CCGUGAGCCGUUUCGUCUGAAACA   1
  ||||||||||||||||*||||||*
targets:1428   GGCACUCGGCAAAGCAUACUUUGC   1451

2.5 Zea mays full-length cDNA clone ZM_BFb0310H18 mRNA, complete cds NA coding protein psRNATarget
BT064046.1
ncRNA:24   CCGUGAGCCGUUUCGUCUGAAACA   1
  ||||||||||||||||*||||||*
targets:1565   GGCACUCGGCAAAGCAUACUUUGC   1588

2.5 Zea mays full-length cDNA clone ZM_BFc0133L10 mRNA, complete cds NA coding protein psRNATarget
NM_001175109.1
ncRNA:24   CCGUGAGCCGUUUCGUCUGAAACA   1
  ||||||||||||||||*||||||*
targets:1565   GGCACUCGGCAAAGCAUACUUUGC   1588

2.5 Zea mays 1-aminocyclopropane-1-carboxylate oxidase2 (cl955_1), mRNA NA coding protein psRNATarget