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BaseInfo

ncRNA ID osa-miRf10557-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - ACUCAUCUGUGACGGGCAUU - NA
Stem-loop(if miRNA)    --G                        AUA
GAU   ACUCAUCUGUGACGGGCAUUAACU   G
|||   ||||||||||||||||||||||||
CUA   UGAGUAGACACUGCCCGUAAUUGA   C
   AUA                        AUA
Stem-loop sequence GAUGACUCAUCUGUGACGGGCAUUAACUAUAGCAUAAGUUAAUGCCCGUCACAGAUGAGUAUAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK064906.1
ncRNA:20   UUACGGGCAGUGUCUACUCA   1
  ||*|||||||||||||||||
targets:2046   AAAGCCCGUCACAGAUGAGU   2065

1.0 Oryza sativa Japonica Group cDNA clone:J013000L21, full insert sequence NA coding protein psRNATarget
AK288447.1
ncRNA:20   UUACGGGCAGUGUCUACUCA   1
  *=*|||||||||||||||||
targets:561   CGAGCCCGUCACAGAUGAGU   580

2.0 Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence NA coding protein psRNATarget
HI403854.1
ncRNA:20   UUACGGGCAGUGUCUACUCA   1
  ||*|||||||||||||||*|
targets:83   AAAGCCCGUCACAGAUGACU   102

2.5 Sequence 1979 from Patent EP2074227 NA coding protein psRNATarget
JB164315.1
ncRNA:20   UUACGGGCAGUGUCUACUCA   1
  ||*|||||||||||||||*|
targets:83   AAAGCCCGUCACAGAUGACU   102

2.5 Sequence 1979 from Patent EP2559767 NA coding protein psRNATarget
LQ235984.1
ncRNA:20   UUACGGGCAGUGUCUACUCA   1
  ||*|||||||||||||||*|
targets:83   AAAGCCCGUCACAGAUGACU   102

2.5 Sequence 1979 from Patent EP2985353 NA coding protein psRNATarget
HI403775.1
ncRNA:20   UUACGGGCAGUGUCUACUCA   1
  ||*|||||||||||||||*|
targets:88   AAAGCCCGUCACAGAUGACU   107

2.5 Sequence 1900 from Patent EP2074227 NA coding protein psRNATarget
JB164236.1
ncRNA:20   UUACGGGCAGUGUCUACUCA   1
  ||*|||||||||||||||*|
targets:88   AAAGCCCGUCACAGAUGACU   107

2.5 Sequence 1900 from Patent EP2559767 NA coding protein psRNATarget
LQ235905.1
ncRNA:20   UUACGGGCAGUGUCUACUCA   1
  ||*|||||||||||||||*|
targets:88   AAAGCCCGUCACAGAUGACU   107

2.5 Sequence 1900 from Patent EP2985353 NA coding protein psRNATarget
AK068923.1
ncRNA:20   UUACGGGCAGUGUCUACUCA   1
  *|*|||||||||||||||*|
targets:1219   UAGGCCCGUCACAGAUGACU   1238

2.5 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget