Search result

BaseInfo

ncRNA ID novel_zma_miR9597
Species Zea mays
Class miRNA
Genome position Chr7:152710312-152710389 [+]
Reference genome RefGen_v4
Source SRR4237225
Length 24
Mature sequence(if miRNA) 1 - AAGCACUCGGCAAAGAAACUCUUU - 24
Stem-loop(if miRNA) --           A     A               CCAA
  AAGCACUCGGC AAGAA CUCUUUGCCGAGUGU    A
  ||||||||||| ||||| |||||||||||||||
  UUUGUGAGCCG UUCUU GAGAAACGGCUCACA    A
CU           C     C               AAAU
Stem-loop sequence AAGCACUCGGCAAAGAAACUCUUUGCCGAGUGUCCAAAAUAAAACACUCGGCAAAGAGCUUCUUCGCCGAGUGUUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI409785.1
ncRNA:24   UUUCUCAAAGAAACGGCUCACGAA   1
  *=*|||*||||||||||||||||*
targets:75   UGUGAGGUUCUUUGCCGAGUGCUA   98

2.0 Sequence 7910 from Patent EP2074227 NA coding protein psRNATarget
LQ241915.1
ncRNA:24   UUUCUCAAAGAAACGGCUCACGAA   1
  *=*|||*||||||||||||||||*
targets:75   UGUGAGGUUCUUUGCCGAGUGCUA   98

2.0 Sequence 7910 from Patent EP2985353 NA coding protein psRNATarget
JB170246.1
ncRNA:24   UUUCUCAAAGAAACGGCUCACGAA   1
  *=*|||*||||||||||||||||*
targets:75   UGUGAGGUUCUUUGCCGAGUGCUA   98

2.0 Sequence 7910 from Patent EP2559767 NA coding protein psRNATarget
EU974507.1
ncRNA:24   UUUCUCAAAGAAACGGCUCACGAA   1
  *||*||*|||||||||||||*|||
targets:440   UAACAGCUUCUUUGCCGAGUACUU   463

2.5 Zea mays clone 451014 hypothetical protein mRNA, complete cds NA coding protein psRNATarget