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BaseInfo

ncRNA ID	novel_zma_miR9587
Species	Zea mays
Class	miRNA
Genome position	Chr5:223575702-223575785 [+]
Reference genome	RefGen_v4
Source	SRR4237224
Length	21
Mature sequence(if miRNA)	1 - UCGAGGGGAUCCAUGUGGGAG - 21
Stem-loop(if miRNA)	--UC             U     G         C       A     GAGGGGAUCCAUG GGGAG AAUCCCCUC CUAUUUA A     ||||||||||||| ||||| ||||||||| |||||||     CUCCCCUAGGUAC CCCUC UUAGGGGAG GAUAAGU U UAAC             C     A         C       U
Stem-loop sequence	UCGAGGGGAUCCAUGUGGGAGGAAUCCCCUCCCUAUUUAAAUUUGAAUAGCGAGGGGAUUACUCCCCCAUGGAUCCCCUCCAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235127.1	ncRNA:21   GAGGGUGUACCUAGGGGAGCU   1   |||||*|||||||||||||*| targets:88   CUCCCCCAUGGAUCCCCUCCA   108 Target Full Sequence	2.5	Sequence 1122 from Patent EP2985353	NA	coding protein	psRNATarget
JB163458.1	ncRNA:21   GAGGGUGUACCUAGGGGAGCU   1   |||||*|||||||||||||*| targets:88   CUCCCCCAUGGAUCCCCUCCA   108 Target Full Sequence	2.5	Sequence 1122 from Patent EP2559767	NA	coding protein	psRNATarget
HI402997.1	ncRNA:21   GAGGGUGUACCUAGGGGAGCU   1   |||||*|||||||||||||*| targets:88   CUCCCCCAUGGAUCCCCUCCA   108 Target Full Sequence	2.5	Sequence 1122 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001139366.1	ncRNA:21   GAGGGUGUACCUAGGGGAGCU   1   |*|||=||||||||||*|||| targets:168   CGCCCGCAUGGAUCCCGUCGA   188 Target Full Sequence	2.5	Zea mays putative protein kinase superfamily protein (LOC100194330), mRNA	NA	coding protein	psRNATarget
BT036848.1	ncRNA:21   GAGGGUGUACCUAGGGGAGCU   1   |*|||=||||||||||*|||| targets:168   CGCCCGCAUGGAUCCCGUCGA   188 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0143H04 mRNA, complete cds	NA	coding protein	psRNATarget