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BaseInfo

ncRNA ID novel_zma_miR9581
Species Zea mays
Class miRNA
Genome position Chr4:101254121-101254215 [-]
Reference genome RefGen_v4
Source SRR4237224
Length 24
Mature sequence(if miRNA) 72 - AUUUAAUAUAAGAACGUCGGUACC - 95
Stem-loop(if miRNA) --AU     A         C      C          AUUAACCCAC
    UUAAU UAAGAACGU GGUACC AUGUUCUUAA          G
    ||||| ||||||||| |||||| ||||||||||          A
    AAUUA AUUCUUGCA CCAUGG UGCAAGAAUU          A
ACCC     A         C      C          AACUCAAUAC
Stem-loop sequence AUUUAAUAUAAGAACGUCGGUACCCAUGUUCUUAAAUUAACCCACGAACAUAACUCAAUUAAGAACGUCGGUACCCACGUUCUUAAAUUAACCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403416.1
ncRNA:24   CCAUGGCUGCAAGAAUAUAAUUUA   1
  ||||||*|||||||||||||||||
targets:62   GGUACCCACGUUCUUAUAUUAAAU   85

1.0 Sequence 1541 from Patent EP2074227 NA coding protein psRNATarget
LQ235546.1
ncRNA:24   CCAUGGCUGCAAGAAUAUAAUUUA   1
  ||||||*|||||||||||||||||
targets:62   GGUACCCACGUUCUUAUAUUAAAU   85

1.0 Sequence 1541 from Patent EP2985353 NA coding protein psRNATarget
JB163877.1
ncRNA:24   CCAUGGCUGCAAGAAUAUAAUUUA   1
  ||||||*|||||||||||||||||
targets:62   GGUACCCACGUUCUUAUAUUAAAU   85

1.0 Sequence 1541 from Patent EP2559767 NA coding protein psRNATarget