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BaseInfo

ncRNA ID	osa-miRf10554-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - AUGGUUUCUCCACCAGUGUAC - NA
Stem-loop(if miRNA)	U  ----    AAAUAUUACU   U --  UAU  -  AUAUACUGUGAACUAAUUAUUUCAAAUAUUAUUAA CGACGAAAGAUGGUUUCUCCACCAGUG AC    CACA          GCA G  CA   CU AC                                   A ||||||||||||||||||||||||||| ||    ||||          ||| |  ||   || ||                                   A GCUGCUUUCUACCAAAGAGGUGGUCAC UG    GUGU          AGC U  GU   UC CU                                   U                            -  ACAU    ---------C   - GA  ---  U  GCGGAGGAACGAAGUUUGUUCGUUGGUGUAUACAA
Stem-loop sequence	CGACGAAAGAUGGUUUCUCCACCAGUGUACCACAAAAUAUUACUGCAUGCAUAUCUACAUAUACUGUGAACUAAUUAUUUCAAAUAUUAUUAAAAUAACAUAUGUGGUUGCUUGUUUGAAGCAAGGAGGCGUCUCUUGAGUCGACUGUGUACAGUCACUGGUGGAGAAACCAUCUUUCGUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK120133.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   ||||||||||||||||||||| targets:3521   GUACACUGGUGGAGAAACCAU   3541 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013027B11, full insert sequence	NA	coding protein	psRNATarget
XM_015786472.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   ||||||||||||||||||||| targets:3521   GUACACUGGUGGAGAAACCAU   3541 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA4 (LOC4340717), mRNA	putative disease resistance protein RGA4(LOC4340717)	coding protein	psRNATarget
XM_015763365.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   **||||||||||||||||||| targets:840   AAACACUGGUGGAGAAACCAU   860 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279581 (LOC107279581), transcript variant X1, mRNA	uncharacterized LOC107279581(LOC107279581)	coding protein	psRNATarget
AK288863.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   **||||||||||||||||||| targets:948   ACACACUGGUGGAGAAACCAU   968 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090077I20, full insert sequence	NA	coding protein	psRNATarget
AK242216.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   **|||||||||||||||||=| targets:544   UCACACUGGUGGAGAAACCGU   564 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   **|||||||||||||||=||| targets:1200   ACACACUGGUGGAGAAAUCAU   1220 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK121613.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   *|*|||||||||||||||||| targets:1877   CUCCACUGGUGGAGAAACCAU   1897 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J033043J23, full insert sequence	NA	coding protein	psRNATarget
AK100339.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   *||||||*||||||||||||| targets:1989   CUACACUCGUGGAGAAACCAU   2009 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023081I19, full insert sequence	NA	coding protein	psRNATarget
XM_015759291.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   *||||||*||||||||||||| targets:1988   CUACACUCGUGGAGAAACCAU   2008 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group proline-rich receptor-like protein kinase PERK4 (LOC4347953), mRNA	proline-rich receptor-like protein kinase PERK4(LOC4347953)	coding protein	psRNATarget
XM_015759969.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   ||*||=*|||||||||||||| targets:1772   GUUCAUGGGUGGAGAAACCAU   1792 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group F-box/LRR-repeat protein At3g58930 (LOC9269963), transcript variant X3, mRNA	F-box/LRR-repeat protein At3g58930(LOC9269963)	coding protein	psRNATarget
XM_015759968.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   ||*||=*|||||||||||||| targets:3270   GUUCAUGGGUGGAGAAACCAU   3290 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group F-box/LRR-repeat protein At3g58930 (LOC9269963), transcript variant X1, mRNA	F-box/LRR-repeat protein At3g58930(LOC9269963)	coding protein	psRNATarget
XM_015768991.1	ncRNA:21   CAUGUGACCACCUCUUUGGUA   1   ***||||||||||||||*||| targets:1903   CGCCACUGGUGGAGAAAACAU   1923 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group stemar-13-ene synthase-like (LOC107276259), mRNA	stemar-13-ene synthase-like(LOC107276259)	coding protein	psRNATarget