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BaseInfo

ncRNA ID novel_zma_miR9561
Species Zea mays
Class miRNA
Genome position Chr3:213978761-213978934 [-]
Reference genome RefGen_v4
Source SRR4237224
Length 22
Mature sequence(if miRNA) 1 - AUUGAUCACCGACCAGAGGCUC - 22
Stem-loop(if miRNA) --           A            C      C                      C           A UG AAAAU  AU    G
  GCCUCUGGUCG UGAUCAAUGGCC CACAAC CCUAUUUUUGUCGAAAAUAGCA GAACGACUAUU U  A     UC  AGGU U
  ||||||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||||||| |  |     ||  ||||
  CGGAGACCAGC ACUAGUUACCGG GUGUUG GGGUAAAAACAGCUUUUAUCGU CUUGCUGGUAA A  U     GG  UCCG U
CU           C            U      A                      A           A GU AUUAU  CU    A
Stem-loop sequence GCCUCUGGUCGAUGAUCAAUGGCCCCACAACCCCUAUUUUUGUCGAAAAUAGCACGAACGACUAUUAUUGAAAAAUUCAUAGGUGUUAGCCUUCGGUAUUAUUGAAAAUGGUCGUUCAUGCUAUUUUCGACAAAAAUGGGAGUUGUGUGGCCAUUGAUCACCGACCAGAGGCUC