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BaseInfo

ncRNA ID	novel_zma_miR9559
Species	Zea mays
Class	miRNA
Genome position	Chr10:46778709-46778813 [-]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	82 - GGCUGACGUCAGGCCGUCGGACAU - 105
Stem-loop(if miRNA)	--    -     C                 CU  C                 A   GGCU GACGU AGGCCGUCGGACAUAAG  UU UUUAUGUCCGACGGCUU U   |||| ||||| |||||||||||||||||  || ||||||||||||||||| G   CCGG CUGCA UUCGGCAGCCUGUAUUC  AA AAAUACAGGCUGCCGGA C UG    U     -                 CC  C                 C
Stem-loop sequence	GGCUGACGUCAGGCCGUCGGACAUAAGCUUUCUUUAUGUCCGACGGCUUAUGCCAGGCCGUCGGACAUAAACAACCCUUAUGUCCGACGGCUUACGUCUGGCCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KU512860.1	ncRNA:24   UACA-GGCUGCCGGACUGCAGUCGG   1   **||-|||||||||*|||||||||* targets:490   CCGUACCGACGGCCGGACGUCAGCG   514 Target Full Sequence	2.5	Zea mays TIFY9 mRNA, complete cds	NA	coding protein	psRNATarget
DQ244202.1	ncRNA:24   UACA-GGCUGCCGGACUGCAGUCGG   1   **||-|||||||||*|||||||||* targets:586   CCGUACCGACGGCCGGACGUCAGCG   610 Target Full Sequence	2.5	Zea mays clone 3185 mRNA sequence	NA	coding protein	psRNATarget
EU966478.1	ncRNA:24   UACA-GGCUGCCGGACUGCAGUCGG   1   **||-|||||||||*|||||||||* targets:596   CCGUACCGACGGCCGGACGUCAGCG   620 Target Full Sequence	2.5	Zea mays clone 294781 ZIM motif family protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157789.2	ncRNA:24   UACA-GGCUGCCGGACUGCAGUCGG   1   **||-|||||||||*|||||||||* targets:611   CCGUACCGACGGCCGGACGUCAGCG   635 Target Full Sequence	2.5	Zea mays ZIM motif family protein (gpm925), mRNA	NA	coding protein	psRNATarget
EU970040.1	ncRNA:24   UACA-GGCUGCCGGACUGCAGUCGG   1   **||-|||||||||*|||||||||* targets:612   CCGUACCGACGGCCGGACGUCAGCG   636 Target Full Sequence	2.5	Zea mays clone 338910 ZIM motif family protein mRNA, complete cds	NA	coding protein	psRNATarget