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BaseInfo

ncRNA ID novel_zma_miR9545
Species Zea mays
Class miRNA
Genome position Chr4:32646853-32646995 [+]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - UAGGAGCUUGUUCGAGAACAGAAG - 24
Stem-loop(if miRNA) --     G      -  A  -AC   A      U    A       U      UAA  UCUUAUUAUUUAAAAUA
  UAGGA CUUGUU CG GA   AGA GUAAUA AGAG GAUUGAG GGGCUA   UC                 A
  ||||| |||||| || ||   ||| |||||| |||| ||||||| ||||||   ||                 A
  AUUCU GAACAA GC CU   UCU CAUUGU UCUC CUAAUUC CCCGAU   UU                 A
AG     -      A  -  CCU   -      U    -       U      --C  AAUGAAACAGGAGUGAU
Stem-loop sequence UAGGAGCUUGUUCGAGAACAGAAGUAAUAUAGAGAGAUUGAGUGGGCUAUAAUCUCUUAUUAUUUAAAAUAAAAUAGUGAGGACAAAGUAAUUCUAGCCCUCUUAAUCCUCUUUGUUACUCUUCCUCCGAAACAAGUCUUAGA