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BaseInfo

ncRNA ID	novel_zma_miR9533
Species	Zea mays
Class	miRNA
Genome position	Chr4:156930409-156930460 [-]
Reference genome	RefGen_v4
Source	SRR1997865;SRR1997866
Length	24
Mature sequence(if miRNA)	29 - AGAAUAGAACGGCUCCAUUCUCAA - 52
Stem-loop(if miRNA)	--        AC  C        CAA   AGAAUAGA  GG UCCAUUCU   A   ||||||||  || ||||||||   UCUUAUCU  CC AGGUAAGA   U UA        CA  A        UCA
Stem-loop sequence	AGAAUAGAACGGCUCCAUUCUCAAAUACUAGAAUGGAACCACUCUAUUCUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU967869.1	ncRNA:24   AACUCUUACCUCGGCAAGAUAAGA   1   ||||||||||||||*||||||||| targets:1463   UUGAGAAUGGAGCCAUUCUAUUCU   1486 Target Full Sequence	1.5	Zea mays clone 306743 mRNA sequence	NA	coding protein	psRNATarget
XM_008654235.2	ncRNA:24   AACUCUUACCUCGGCAAGAUAAGA   1   ||||||||||||||*||||||||| targets:3907   UUGAGAAUGGAGCCAUUCUAUUCU   3930 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103632405 (LOC103632405), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008654235.2	ncRNA:24   AACUCUUACCUCGGCAAGAUAAGA   1   |||-||||||||||*||||||||| targets:4191   UUG-GAAUGGAGCCAUUCUAUUCU   4213 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103632405 (LOC103632405), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008661467.2	ncRNA:24   AACUCUUACCUCGGCAAGAUAAGA   1   ||*|*|||*||||||*|||||||| targets:1215   UUAAAAAUAGAGCCGGUCUAUUCU   1238 Target Full Sequence	2.5	PREDICTED: Zea mays ethylene-responsive transcription factor TINY (LOC103638592), mRNA	NA	coding protein	psRNATarget