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BaseInfo

ncRNA ID novel_zma_miR9530
Species Zea mays
Class miRNA
Genome position Chr1:100647280-100647361 [-]
Reference genome RefGen_v4
Source SRR4237224
Length 24
Mature sequence(if miRNA) 1 - GUUAGACAGGGAACCAAAUAUACC - 24
Stem-loop(if miRNA) ---U          --     UAACUGUGUCAUUGUUUAGUU
    UAUUUGGUUU  GUGAC                     U
    ||||||||||  |||||                     G
    AUAAACCAAG  ACAGA                     U
CCAU          GG     UUGAGCUGAAAAAACAAUCAG
Stem-loop sequence UUAUUUGGUUUGUGACUAACUGUGUCAUUGUUUAGUUUGUGACUAACAAAAAAGUCGAGUUAGACAGGGAACCAAAUAUACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235498.1
ncRNA:24   CCAUAUAAACCAAGGGACAGAUUG   1
  |||||=||||||||*|||||||||
targets:3   GGUAUGUUUGGUUCGCUGUCUAAC   26

2.5 Sequence 1493 from Patent EP2985353 NA coding protein psRNATarget
HI403368.1
ncRNA:24   CCAUAUAAACCAAGGGACAGAUUG   1
  |||||=||||||||*|||||||||
targets:3   GGUAUGUUUGGUUCGCUGUCUAAC   26

2.5 Sequence 1493 from Patent EP2074227 NA coding protein psRNATarget
JB163829.1
ncRNA:24   CCAUAUAAACCAAGGGACAGAUUG   1
  |||||=||||||||*|||||||||
targets:3   GGUAUGUUUGGUUCGCUGUCUAAC   26

2.5 Sequence 1493 from Patent EP2559767 NA coding protein psRNATarget