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BaseInfo

ncRNA ID novel_zma_miR9525
Species Zea mays
Class miRNA
Genome position Chr1:167509180-167509234 [-]
Reference genome RefGen_v4
Source SRR4237224
Length 24
Mature sequence(if miRNA) 32 - AGUAGACUCGAUCUUUGAGCACCC - 55
Stem-loop(if miRNA) --     A    A         AC   U
  AGUAG CUCG UCUUUGAGC  CCG U
  ||||| |||| |||||||||  ||| A
  UCGUU GAGC GGGAGCUCG  GGC U
GU     -    -         AC   G
Stem-loop sequence AGUAGACUCGAUCUUUGAGCACCCGUUAUGCGGCAGCUCGAGGGCGAGUUGCUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538874.1
ncRNA:24   CCCACGAGUUUCUAGCUCAGAUGA   1
  ||*||||||||||*||||||||||
targets:1309   GGAUGCUCAAAGACCGAGUCUACU   1332

1.5 PREDICTED: Zea mays hypothetical protein (cl50727_1), transcript variant X3, mRNA NA coding protein psRNATarget