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BaseInfo

ncRNA ID	osa-miRf10549-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GUCAUCUCAAUCGGGCCUAAA - NA
Stem-loop(if miRNA)	CU    --U   ----   A    AGUGUCAUCGGUGACGGGCU GCGAGGUCAUCUCAAUCGGGCCUAAAU  UUGC   CGU    CAC GAUG                    A |||||||||||||||||||||||||||  ||||   |||    ||| |||| UGCUUCAGUAGAGUUAGCCCGGAUUUA  AACG   CGA    UAC AUGA                    U                            --    UGG   CAUC   -    GUGAAAUCCGGGUUCAUGUA
Stem-loop sequence	GCGAGGUCAUCUCAAUCGGGCCUAAAUCUUUGCUCGUCACAGAUGAGUGUCAUCGGUGACGGGCUAUAUGUACUUGGGCCUAAAGUGAGUACAUCUACAGCGGUGCAAAUUUAGGCCCGAUUGAGAUGACUUCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288447.1	ncRNA:21   AAAUCCGGGCUAACUCUACUG   1   ||||||||||||||||||||| targets:641   UUUAGGCCCGAUUGAGAUGAC   661 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence	NA	coding protein	psRNATarget
AK288346.1	ncRNA:21   AAAUCCGGGCUAACUCUACUG   1   ||||||||||||||||||||* targets:553   UUUAGGCCCGAUUGAGAUGAG   573 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090023M06, full insert sequence	NA	coding protein	psRNATarget
AK288346.1	ncRNA:21   AAAUCCGGGCUAACUCUACUG   1   ||||||||||*|||||||||* targets:596   UUUAGGCCCGUUUGAGAUGAG   616 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090023M06, full insert sequence	NA	coding protein	psRNATarget
AK119390.1	ncRNA:21   AAAUCCGGGCUAACUCUACUG   1   ||||||||||*|||||||||| targets:3061   UUUAGGCCCGUUUGAGAUGAC   3081 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence	NA	coding protein	psRNATarget
AK068923.1	ncRNA:21   AAAUCCGGGCUAACUCUACUG   1   ||||||||||||||||||*|| targets:1018   UUUAGGCCCGAUUGAGAUAAC   1038 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence	NA	coding protein	psRNATarget
AK068923.1	ncRNA:21   AAAUCCGGGCUAACUCUACUG   1   |*|||*||||||||||||*|| targets:1104   UGUAGUCCCGAUUGAGAUAAC   1124 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence	NA	coding protein	psRNATarget
AK288547.1	ncRNA:21   AAAUCCGGGCUAACUCUACUG   1   |||||||||||||||||||** targets:57   UUUAGGCCCGAUUGAGAUGUG   77 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090046I18, full insert sequence	NA	coding protein	psRNATarget