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BaseInfo

ncRNA ID	novel_zma_miR9519
Species	Zea mays
Class	miRNA
Genome position	Chr1:295716650-295716773 [-]
Reference genome	RefGen_v4
Source	SRR4237224
Length	21
Mature sequence(if miRNA)	104 - UAACAGUUCCCCUAAAGCGCC - 124
Stem-loop(if miRNA)	UAA    ---    C      -  CCCCAAC     -CAU     UU        C        A    CAGU   UCCC UAAAGC GC       UUUUU    AGCCC  AAAACUCC UCAUUUGU G    ||||   |||| |||||| ||       |||||    |||||  |||||||| ||||||||    GUCG   AGGG AUUUCG CG       AAAGA    UCGGG  UUUUGAGG AGUAAACA C -AG    UCU    A      U  -UCAAAC     CCCC     UU        -        U
Stem-loop sequence	UAACAGUUCCCCUAAAGCGCCCCCAACUUUUUCAUAGCCCUUAAAACUCCCUCAUUUGUAGCUACAAAUGAGGAGUUUUUUGGGCUCCCCAGAAACAAACUGCUGCUUUAAGGGAUCUGCUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546765.1	ncRNA:21   CCGCGAAAUCCCCUUGACAAU   1   *||*||||||||||||||||= targets:2898   AGCACUUUAGGGGAACUGUUG   2918 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103643482 (LOC103643482), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546766.1	ncRNA:21   CCGCGAAAUCCCCUUGACAAU   1   *||*||||||||||||||||= targets:2903   AGCACUUUAGGGGAACUGUUG   2923 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103643482 (LOC103643482), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU949841.1	ncRNA:21   CCGCGAAAUCCCCUUGACAAU   1   |||*||||||||||*|||||| targets:163   GGCUCUUUAGGGGACCUGUUA   183 Target Full Sequence	2.5	Zea mays clone 448270 mRNA sequence	NA	coding protein	psRNATarget
BT054357.1	ncRNA:21   CCGCGAAAUCCCCUUGACAAU   1   |||*||||||||||*|||||| targets:912   GGCUCUUUAGGGGACCUGUUA   932 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0377I19 mRNA, complete cds	NA	coding protein	psRNATarget
BT066338.1	ncRNA:21   CCGCGAAAUCCCCUUGACAAU   1   |||*||||||||||*|||||| targets:2732   GGCUCUUUAGGGGACCUGUUA   2752 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0124A18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152504.1	ncRNA:21   CCGCGAAAUCCCCUUGACAAU   1   |||*||||||||||*|||||| targets:2732   GGCUCUUUAGGGGACCUGUUA   2752 Target Full Sequence	2.5	Zea mays Topoisomerase II-associated protein PAT1 (LOC100279503), mRNA	NA	coding protein	psRNATarget