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BaseInfo

ncRNA ID novel_zma_miR9514
Species Zea mays
Class miRNA
Genome position Chr1:293804353-293804454 [+]
Reference genome RefGen_v4
Source SRR4237224
Length 22
Mature sequence(if miRNA) 81 - UACCCGUGGGUCUGUUAUUGGA - 102
Stem-loop(if miRNA) ---UAGAGAU   -A       ----------      -  CCG      -     -  A
          GGC  AUGGGUA          CCCGCG AC   AUACCC GAUGG GU U
          |||  |||||||          |||||| ||   |||||| ||||| ||
          CUG  UGCCCAU          GGGUGU UG   UAUGGG UUACC CA U
AGGUUAUUGU   GG       CUUAUAAAUC      A  ---      A     U  U
Stem-loop sequence UAGAGAUGGCAAUGGGUACCCGCGACCCGAUACCCGAUGGGUAUUUACUCCAUUAGGGUAUGUAUGUGGGCUAAAUAUUCUACCCGUGGGUCUGUUAUUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008667001.2
ncRNA:22   AGGUUAUUGUCUGGGUGCCCAU   1
  *|||*|||||*|||||||||||
targets:51   CCCAUUAACAAACCCACGGGUA   72

2.5 PREDICTED: Zea mays histone H3.v1 (LOC103643837), mRNA NA coding protein psRNATarget