ncRNA ID | novel_zma_miR9511 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:158413191-158413393 [-] |
Reference genome | RefGen_v4 |
Source | SRR4237224;SRR4237225 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUGUUAGCAUGUUAGUACCCU - 21 |
Stem-loop(if miRNA) |
--GA     -   U                     C  AACCAC                CAAUCUCACCUCCUCUCA  ---   UUUUCUAAAGAACCCCUAUGUUUUUU     UGCUA CAU CUAAUAUCAAAUCUUGUCUAU GG      UAUCUACGGCUGAGUG                  GA   CUA                          A     ||||| ||| ||||||||||||||||||||| ||      ||||||||||||||||                  ||   |||     AUGAU GUA GAUUGUAGUUUAGAAUAGGUA CC      GUAGAUGCUGACUCAC                  CG   AGG                          U UCCC     U   C                     A  GAGAUA                -----------------U  UCA   UGAACCCCUGCCUGUGCUAGAUAAGA |
Stem-loop sequence | GAUGCUACAUUCUAAUAUCAAAUCUUGUCUAUCGGAACCACUAUCUACGGCUGAGUGCAAUCUCACCUCCUCUCAGACUAUUUUCUAAAGAACCCCUAUGUUUUUUAUAGAAUAGAUCGUGUCCGUCCCCAAGUGGAACUGCUCACUCAGUCGUAGAUGAUAGAGCCAAUGGAUAAGAUUUGAUGUUAGCAUGUUAGUACCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT016910.1 |
|
2.0 | Zea mays clone Contig743 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ058715.1 |
|
2.0 | TSA: Zea mays contig59837, mRNA sequence | NA | coding protein | psRNATarget |