| ncRNA ID | novel_zma_miR9510 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr9:99879057-99879182 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR4237224 |
| Length | 24 |
| Mature sequence(if miRNA) | 103 - UUAGGUAGCGAACCAAACAGGCCC - 126 |
| Stem-loop(if miRNA) |
-- G AACUGC ------------- CG G GCCUGUUUGGUUCGU GCU GCCACACUUUGCCUA AGGUUAGU UUC A ||||||||||||||| ||| ||||||||||||||| |||||||| ||| A CGGACAAACCAAGCG UGG CGGUGUGAAACGGAU UCUAAUCA AAG U CC A AUUCAA UGAAAAGACGGAU AG U |
| Stem-loop sequence | GCCUGUUUGGUUCGUGGCUAACUGCGCCACACUUUGCCUAAGGUUAGUCGUUCGAAUUGAAGAACUAAUCUUAGGCAGAAAAGUUAGGCAAAGUGUGGCAACUUAGGUAGCGAACCAAACAGGCCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_008676108.2 |
|
0.0 | PREDICTED: Zea mays CASP-like protein Os12g0568700 (LOC103650532), mRNA | NA | coding protein | psRNATarget | |||||||||
| NM_001149797.1 |
|
0.0 | Zea mays CASP-like protein Os12g0568700 (LOC103650532), mRNA | NA | coding protein | psRNATarget | |||||||||
| EU958119.1 |
|
0.0 | Zea mays clone 1674247 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| HI403286.1 |
|
1.5 | Sequence 1411 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
| JB163747.1 |
|
1.5 | Sequence 1411 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
| LQ235416.1 |
|
1.5 | Sequence 1411 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
| EZ060318.1 |
|
1.0 | TSA: Zea mays contig61440, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| AY108857.1 |
|
2.5 | Zea mays PCO060055 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| BT038009.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0206M21 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| XM_008656231.2 |
|
1.5 | PREDICTED: Zea mays hypothetical protein (LOC100216556), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| EZ049437.1 |
|
1.5 | TSA: Zea mays contig50555, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| AY107944.2 |
|
2.5 | Zea mays PCO122092 mRNA sequence | NA | coding protein | psRNATarget |