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BaseInfo

ncRNA ID novel_zma_miR9508
Species Zea mays
Class miRNA
Genome position Chr10:52718798-52718866 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - CCGUUUUCGGAAUGGUUGACGUGC - 24
Stem-loop(if miRNA) AUUCG   U   -        -       GACAAU
     GUU GCC UUCUGAAA CGGGUGU      G
     ||| ||| |||||||| |||||||
     CAG UGG AAGGCUUU GCCCACA      C
-CGUG   U   U        U       GCCCCA
Stem-loop sequence AUUCGGUUUGCCUUCUGAAACGGGUGUGACAAUGCACCCCGACACCCGUUUUCGGAAUGGUUGACGUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ064844.1
ncRNA:24   CGUGCAGUUGGUAAGGCUUUUGCC   1
  ||||||||*||||||=||||||||
targets:16   GCACGUCACCCAUUCUGAAAACGG   39

2.5 TSA: Zea mays contig00476, mRNA sequence NA coding protein psRNATarget