ncRNA ID | novel_zma_miR9502 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:180491588-180491714 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237224 |
Length | 24 |
Mature sequence(if miRNA) | 104 - GGCAUUGAAACCAAGUGUGACAUG - 127 |
Stem-loop(if miRNA) |
--         A            A       C A                CCUUAUGACUUUU     U   UGUCACACU GGUUUCAAUGCC UUUUGGA A UUUUGCUUUUCUGUGC             GCAUG G   ||||||||| |||||||||||| ||||||| | ||||||||||||||||             |||||   ACAGUGUGA CCAAAGUUACGG AAAACCU U AAGACGGAAAGAUACG             CGUAC U GU         A            C       A A                -------------     A |
Stem-loop sequence | UGUCACACUAGGUUUCAAUGCCAUUUUGGACAAUUUUGCUUUUCUGUGCCCUUAUGACUUUUGCAUGUGUACAUGCGCAUAGAAAGGCAGAAAUAUCCAAAACGGCAUUGAAACCAAGUGUGACAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008654448.2 |
|
2.5 | PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase At1g06840 (LOC103632695), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008654441.2 |
|
2.5 | PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase At1g06840 (LOC103632695), transcript variant X1, mRNA | NA | coding protein | psRNATarget |