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BaseInfo

ncRNA ID novel_zma_miR9502
Species Zea mays
Class miRNA
Genome position Chr8:180491588-180491714 [+]
Reference genome RefGen_v4
Source SRR4237224
Length 24
Mature sequence(if miRNA) 104 - GGCAUUGAAACCAAGUGUGACAUG - 127
Stem-loop(if miRNA) --         A            A       C A                CCUUAUGACUUUU     U
  UGUCACACU GGUUUCAAUGCC UUUUGGA A UUUUGCUUUUCUGUGC             GCAUG G
  ||||||||| |||||||||||| ||||||| | ||||||||||||||||             |||||
  ACAGUGUGA CCAAAGUUACGG AAAACCU U AAGACGGAAAGAUACG             CGUAC U
GU         A            C       A A                -------------     A
Stem-loop sequence UGUCACACUAGGUUUCAAUGCCAUUUUGGACAAUUUUGCUUUUCUGUGCCCUUAUGACUUUUGCAUGUGUACAUGCGCAUAGAAAGGCAGAAAUAUCCAAAACGGCAUUGAAACCAAGUGUGACAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654448.2
ncRNA:24   GUACAGUGUGAACCAAAGUUACGG   1
  *||*||||||||||||||*||||*
targets:1430   AAUUUCACACUUGGUUUCUAUGCA   1453

2.5 PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase At1g06840 (LOC103632695), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008654441.2
ncRNA:24   GUACAGUGUGAACCAAAGUUACGG   1
  *||*||||||||||||||*||||*
targets:2014   AAUUUCACACUUGGUUUCUAUGCA   2037

2.5 PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase At1g06840 (LOC103632695), transcript variant X1, mRNA NA coding protein psRNATarget