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BaseInfo

ncRNA ID	novel_zma_miR9497
Species	Zea mays
Class	miRNA
Genome position	Chr4:165231088-165231151 [-]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	1 - AGUUAAGUUAACUUCUGACGGCUG - 24
Stem-loop(if miRNA)	--   UC                       CG   GCC  UCGGAAGUUAACUUAACUUCCGA  G   |||  |||||||||||||||||||||||  C   CGG  AGUCUUCAAUUGAAUUGAAGGCU  C GU   -C                       CU
Stem-loop sequence	GCCUCUCGGAAGUUAACUUAACUUCCGACGGCCUCUCGGAAGUUAAGUUAACUUCUGACGGCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020553436.1	ncRNA:24   GUCGGCAGUCUUCAAUUGAAUUGA   1   =**==|||=|||||||=||||||| targets:1706   UUUUUGUCGGAAGUUAGCUUAACU   1729 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100286139 (si606063d04), transcript variant X4, mRNA	NA	coding protein	psRNATarget
BT062217.1	ncRNA:24   GUCGGCAGUCUUCAAUUGAAUUGA   1   =**==|||=|||||||=||||||| targets:1576   UUUUUGUCGGAAGUUAGCUUAACU   1599 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0228H22 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682719.2	ncRNA:24   GUCGGCAGUCUUCAAUUGAAUUGA   1   =**==|||=|||||||=||||||| targets:1706   UUUUUGUCGGAAGUUAGCUUAACU   1729 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100286139 (si606063d04), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020553435.1	ncRNA:24   GUCGGCAGUCUUCAAUUGAAUUGA   1   =**==|||=|||||||=||||||| targets:4466   UUUUUGUCGGAAGUUAGCUUAACU   4489 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100286139 (si606063d04), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT069034.2	ncRNA:24   GUCGGCAGUCUUCAAUUGAAUUGA   1   =**==||||*||||||=||||||| targets:195   UUUUUGUCAAAAGUUAGCUUAACU   218 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0146G18 mRNA, complete cds	NA	coding protein	psRNATarget