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BaseInfo

ncRNA ID novel_zma_miR9493
Species Zea mays
Class miRNA
Genome position Chr8:7039751-7039809 [-]
Reference genome RefGen_v4
Source SRR4237224
Length 23
Mature sequence(if miRNA) 1 - CAAAGGCUUCUUUGUCGAGUACU - 23
Stem-loop(if miRNA) --C              G  -C G   ACU
   ACUCGACAAAGAGG CU  G CGA   G
   |||||||||||||| ||  | |||
   UGAGCUGUUUCUUC GA  C GCU   U
UCA              G  AA G   ACA
Stem-loop sequence CACUCGACAAAGAGGGCUCGGCGAACUGUACAUCGGCAAAGGCUUCUUUGUCGAGUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020541919.1
ncRNA:23   UCAUGAGCUGUUUCUUCGGAAAC   1
  =**|||||||||||||*||||||
targets:3   GACACUCGACAAAGAAUCCUUUG   25

1.5 PREDICTED: Zea mays TANK-binding kinase 1-binding protein 1-like (LOC109941331), mRNA NA coding protein psRNATarget