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BaseInfo

ncRNA ID	novel_zma_miR9492
Species	Zea mays
Class	miRNA
Genome position	Chr4:173021181-173021228 [-]
Reference genome	RefGen_v4
Source	SRR1997865;SRR5451004;SRR1997866
Length	24
Mature sequence(if miRNA)	25 - AACGAGCCCGCUCGAACUCGGACG - 48
Stem-loop(if miRNA)	--        C     AA     A   AACGAGCC GCUCG  CUCGG C   |||||||| |||||  ||||| G   UUGCUCGG CGAGC  GAGCC A UA        U     -C     G
Stem-loop sequence	AACGAGCCCGCUCGAACUCGGACGAGCCGAGCCGAGCUGGCUCGUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020549497.1	ncRNA:24   GCAGGCUCAAGCUCGCCCGAGCAA   1   =||||||||||||||*|||||||| targets:3934   UGUCCGAGUUCGAGCUGGCUCGUU   3957 Target Full Sequence	1.5	PREDICTED: Zea mays Amino-acid permease BAT1 (si486073c04), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008673964.2	ncRNA:24   GCAGGCUCAAGCUCGCCCGAGCAA   1   =||||||||||||||*|||||||| targets:3931   UGUCCGAGUUCGAGCUGGCUCGUU   3954 Target Full Sequence	1.5	PREDICTED: Zea mays Amino-acid permease BAT1 (si486073c04), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020549495.1	ncRNA:24   GCAGGCUCAAGCUCGCCCGAGCAA   1   =||||||||||||||*|||||||| targets:3932   UGUCCGAGUUCGAGCUGGCUCGUU   3955 Target Full Sequence	1.5	PREDICTED: Zea mays Amino-acid permease BAT1 (si486073c04), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU950141.1	ncRNA:24   GCAGGCUCAAGCUCGCCCGAGCAA   1   ||*|||||*||||||*|||||||| targets:223   CGACCGAGCUCGAGCUGGCUCGUU   246 Target Full Sequence	2.5	Zea mays clone 462989 mRNA sequence	NA	coding protein	psRNATarget
EU950141.1	ncRNA:24   GCAG--GCUCAAGCUCGCCCGAGCAA   1   |||=--||||*||||||*|||||||| targets:313   CGUUUGCGAGCUCGAGCUGGCUCGUU   338 Target Full Sequence	2.5	Zea mays clone 462989 mRNA sequence	NA	coding protein	psRNATarget