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BaseInfo

ncRNA ID novel_zma_miR9491
Species Zea mays
Class miRNA
Genome position Chr8:46527958-46528024 [-]
Reference genome RefGen_v4
Source SRR4237224;SRR2089704
Length 21
Mature sequence(if miRNA) 1 - AAGUUGGAUCAUAUAAUCUAG - 21
Stem-loop(if miRNA) --         A                 UUAA
  AGAUUAUGU AUCCAACUUAUUUUGAA    G
  ||||||||| |||||||||||||||||    U
  UCUAAUAUA UAGGUUGAAUAAAAUUU    G
GA         C                 CAAC
Stem-loop sequence AGAUUAUGUAAUCCAACUUAUUUUGAAUUAAGUGCAACUUUAAAAUAAGUUGGAUCAUAUAAUCUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT037451.1
ncRNA:21   GAUCUAAUAUACUAGGUUGAA   1
  |*=||||||||*|||||||||
targets:709   CAGGAUUAUAUAAUCCAACUU   729

2.5 Zea mays full-length cDNA clone ZM_BFb0169O18 mRNA, complete cds NA coding protein psRNATarget
NM_001143245.1
ncRNA:21   GAUCUAAUAUACUAGGUUGAA   1
  |*=||||||||*|||||||||
targets:709   CAGGAUUAUAUAAUCCAACUU   729

2.5 Zea mays hypothetical protein (LOC100216853), mRNA NA coding protein psRNATarget
XM_008664648.2
ncRNA:21   GAUCUAAUAUACUAGGUUGAA   1
  **||=||*|||||||||||||
targets:1554   AAAGGUUUUAUGAUCCAACUU   1574

2.0 PREDICTED: Zea mays ABC transporter B family member 14 (LOC103641292), mRNA NA coding protein psRNATarget