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BaseInfo

ncRNA ID	osa-miRf10546-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UUUCAACCGGGGCUAAAGAUC - NA
Stem-loop(if miRNA)	UA        U     AAAG   AUAG ACUAAAGAUGAUCUUUAG  CCGGUUGG AAACU    AUC    A ||||||||||||||||||  |||||||| |||||    ||| UGAUUUUUACUAGAAAUC  GGCCAACU UUUGG    UGG    A                   GG        -     --GA   CGGU
Stem-loop sequence	ACUAAAGAUGAUCUUUAGUACCGGUUGGUAAACUAAAGAUCAUAGAAUGGCGGUAGGGUUUUCAACCGGGGCUAAAGAUCAUUUUUAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288463.1	ncRNA:21   CUAGAAAUCGGGGCCAACUUU   1   |||||||||=||||||||||| targets:425   GAUCUUUAGUCCCGGUUGAAA   445 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
XM_015779829.1	ncRNA:21   CUAGAAAUCGGGGCCAACUUU   1   |||=|||||=||||||||||| targets:1591   GAUUUUUAGUCCCGGUUGAAA   1611 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
AK065811.1	ncRNA:21   CUAGAAAUCGGGGCCAACUUU   1   *||||||||=||||||||||| targets:1872   CAUCUUUAGUCCCGGUUGAAA   1892 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence	NA	coding protein	psRNATarget
CT837755.1	ncRNA:21   CUAGAAAUCGGGGCCAACUUU   1   *||=|||||=||||||||||| targets:1904   CAUUUUUAGUCCCGGUUGAAA   1924 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA248M21, full insert sequence	NA	coding protein	psRNATarget
XM_015774888.1	ncRNA:21   CUAGAAAUCGGGGCCAACUUU   1   |||||*|||=||||||||||| targets:1387   GAUCUCUAGUCCCGGUUGAAA   1407 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group metacaspase-1 (LOC4333012), transcript variant X3, mRNA	metacaspase-1(LOC4333012)	coding protein	psRNATarget
XM_015774887.1	ncRNA:21   CUAGAAAUCGGGGCCAACUUU   1   |||||*|||=||||||||||| targets:1393   GAUCUCUAGUCCCGGUUGAAA   1413 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group metacaspase-1 (LOC4333012), transcript variant X2, mRNA	metacaspase-1(LOC4333012)	coding protein	psRNATarget