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BaseInfo

ncRNA ID novel_zma_miR9487
Species Zea mays
Class miRNA
Genome position Chr4:187045004-187045073 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 47 - UGUUCUCUGGUCAGGCGCGGACGG - 70
Stem-loop(if miRNA) --U    U   -      -       G    AC   A
   GUUC CUG GUCAGG CGCGGAC GUCC  GGC C
   |||| ||| |||||| ||||||| ||||  ||| A
   CGAG GAC UGGUCC GCGCCUG CAGG  CUG G
ACU    -   G      A       G    --   G
Stem-loop sequence UGUUCUCUGGUCAGGCGCGGACGGUCCACGGCACAGGGUCGGACGGUCCGCGACCUGGUGCAGGAGCUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   GGCAGGCGCGGACUGGUCUCUUGU   1
  |||||||||=|||||||||||=||
targets:27   CCGUCCGCGUCUGACCAGAGAGCA   50

2.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget