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BaseInfo

ncRNA ID novel_zma_miR9463
Species Zea mays
Class miRNA
Genome position Chr10:131790296-131790388 [-]
Reference genome RefGen_v4
Source SRR4237224
Length 22
Mature sequence(if miRNA) 72 - UCGACCAGAGGCUCGUACACCA - 93
Stem-loop(if miRNA) --       -    C    --      -CAC    ---------CA      U
  UCGACCA GAGG UCGU  ACACCA    UCCA           UAUGUU C
  ||||||| |||| ||||  ||||||    ||||           |||||| C
  AGCUGGU CUUU AGCA  UGUGGU    AGGU           AUACAG U
AA       U    -    GA      CUUU    UCUUAAACUUG      U
Stem-loop sequence UCGACCAGAGGCUCGUACACCACACUCCACAUAUGUUUCCUUGACAUAGUUCAAAUUCUUGGAUUUCUGGUGUAGACGAUUUCUUGGUCGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI402929.1
ncRNA:22   ACCACAUGCUCGGAGACCAGCU   1
  *||||*||||||||||||||*|
targets:16   AGGUGGACGAGCCUCUGGUCAA   37

2.5 Sequence 1054 from Patent EP2074227 NA coding protein psRNATarget
LQ235059.1
ncRNA:22   ACCACAUGCUCGGAGACCAGCU   1
  *||||*||||||||||||||*|
targets:16   AGGUGGACGAGCCUCUGGUCAA   37

2.5 Sequence 1054 from Patent EP2985353 NA coding protein psRNATarget
JB163390.1
ncRNA:22   ACCACAUGCUCGGAGACCAGCU   1
  *||||*||||||||||||||*|
targets:16   AGGUGGACGAGCCUCUGGUCAA   37

2.5 Sequence 1054 from Patent EP2559767 NA coding protein psRNATarget