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BaseInfo

ncRNA ID	novel_zma_miR9462
Species	Zea mays
Class	miRNA
Genome position	Chr6:162865483-162865541 [+]
Reference genome	RefGen_v4
Source	SRR4237224
Length	24
Mature sequence(if miRNA)	1 - ACACUCGGCAAAGAAACCGCCAGG - 24
Stem-loop(if miRNA)	--A              A  -GC  -   AG    CACUCGGCAAAGAA CC   CA GGG  G    |||||||||||||| ||   || |||    GUGAGCCGUUUCUU GG   GU CCC  G UCC              -  ACU  A   CU
Stem-loop sequence	ACACUCGGCAAAGAAACCGCCAGGGAGGGUCCCCAUGUCAGGUUCUUUGCCGAGUGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI407068.1	ncRNA:24   GGACCGCCAAAGAAACGGCUCACA   1   *|||||||*||||||||||||||* targets:41   GCUGGCGGAUUCUUUGCCGAGUGC   64 Target Full Sequence	2.0	Sequence 5193 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239198.1	ncRNA:24   GGACCGCCAAAGAAACGGCUCACA   1   *|||||||*||||||||||||||* targets:41   GCUGGCGGAUUCUUUGCCGAGUGC   64 Target Full Sequence	2.0	Sequence 5193 from Patent EP2985353	NA	coding protein	psRNATarget
JB167529.1	ncRNA:24   GGACCGCCAAAGAAACGGCUCACA   1   *|||||||*||||||||||||||* targets:41   GCUGGCGGAUUCUUUGCCGAGUGC   64 Target Full Sequence	2.0	Sequence 5193 from Patent EP2559767	NA	coding protein	psRNATarget
JB166664.1	ncRNA:23   GACCGCCAAAGAAACGGCUCACA   1   |||*|||*||||||||||||||| targets:1   CUGACGGAUUCUUUGCCGAGUGU   23 Target Full Sequence	1.0	Sequence 4328 from Patent EP2559767	NA	coding protein	psRNATarget
HI406203.1	ncRNA:23   GACCGCCAAAGAAACGGCUCACA   1   |||*|||*||||||||||||||| targets:1   CUGACGGAUUCUUUGCCGAGUGU   23 Target Full Sequence	1.0	Sequence 4328 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238333.1	ncRNA:23   GACCGCCAAAGAAACGGCUCACA   1   |||*|||*||||||||||||||| targets:1   CUGACGGAUUCUUUGCCGAGUGU   23 Target Full Sequence	1.0	Sequence 4328 from Patent EP2985353	NA	coding protein	psRNATarget
BT067215.1	ncRNA:24   GG---ACCGCCAAAGAAACGGCUCACA   1   ||---||*=||*||||||||||||||* targets:1141   CCGAGUGUUGGCUUCUUUGCCGAGUGC   1167 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0310H18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175109.1	ncRNA:24   GG---ACCGCCAAAGAAACGGCUCACA   1   ||---||*=||*||||||||||||||* targets:1278   CCGAGUGUUGGCUUCUUUGCCGAGUGC   1304 Target Full Sequence	3.0	Zea mays 1-aminocyclopropane-1-carboxylate oxidase2 (cl955_1), mRNA	NA	coding protein	psRNATarget
BT064046.1	ncRNA:24   GG---ACCGCCAAAGAAACGGCUCACA   1   ||---||*=||*||||||||||||||* targets:1278   CCGAGUGUUGGCUUCUUUGCCGAGUGC   1304 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0133L10 mRNA, complete cds	NA	coding protein	psRNATarget
EZ087925.1	ncRNA:24   GG---ACCGCCAAAGAAACGGCUCACA   1   ||---||*=||*||||||||||||||* targets:42   CCGAGUGUUGGCUUCUUUGCCGAGUGC   68 Target Full Sequence	3.0	TSA: Zea mays contig23571, mRNA sequence	NA	coding protein	psRNATarget