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BaseInfo

ncRNA ID	osa-miRf10543-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UCCCGGUUGGUAACAACAACCGGAA - NA
Stem-loop(if miRNA)	C      CUUAACC         UU    AAAGAA   G AAAUAGCGGGAAAAUAUCUUUACUCC UAUCUUUAGU CCGGUU       CUAACCGGG  UAAA      UUU G                          C |||||||||| ||||||       |||||||||  ||||      ||| | AUAGAAAUUA GGCCAA       GGUUGGCCC  AUUU      UAU A                          G           A      CAACAAU         UC    -----C   - GAAAUGAGGGCCAACAAGAGUGGUUG
Stem-loop sequence	UAUCUUUAGUCCCGGUUCUUAACCCUAACCGGGUUUAAAAAAGAAUUUGGAAAUAGCGGGAAAAUAUCUUUACUCCCGGUUGGUGAGAACAACCGGGAGUAAAGAUAUCUUUACUCCCGGUUGGUAACAACAACCGGAAUUAAAGAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289098.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   |*|||||||*||||||||||||||| targets:156   UCCCGGUUGGUGUUACCAACCGGGA   180 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   |*|||||||*|*||||||||||||| targets:113   UCCCGGUUGGUUUUACCAACCGGGA   137 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   |*||||||**||||||||||||||| targets:915   UCCCGGUUUGUGUUACCAACCGGGA   939 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
XM_015755226.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   |*|||||||*|||||||||||||*| targets:79   UCCCGGUUGAUGUUACCAACCGGUA   103 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278786 (LOC107278786), mRNA	uncharacterized LOC107278786(LOC107278786)	coding protein	psRNATarget
AK288377.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   |*|||||||*|||||||||||*||| targets:1385   UCCCGGUUGGUGUUACCAACCUGGA   1409 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK288191.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   |*|||||||||**|||||||||||| targets:1571   UCCCGGUUGUUUAUACCAACCGGGA   1595 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090007A11, full insert sequence	NA	coding protein	psRNATarget
JB164979.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   **|||||||*||*|||||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
HI404518.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   **|||||||*||*|||||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   **|||||||*||*|||||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
AK288424.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   |*||||||**||||||||||||||| targets:2390   UCCCGGUUAGUGUUACCAACCGGGA   2414 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   |*|||||||*|||||||||||||*| targets:1839   UCCCGGUUGGUGUUACCAACCGGAA   1863 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:25   AAGGCCAACAACAAUGGUUGGCCCU   1   |*||*||||*||||||||||||||| targets:2397   UCCCCGUUGGUGUUACCAACCGGGA   2421 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget