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BaseInfo

ncRNA ID novel_zma_miR9456
Species Zea mays
Class miRNA
Genome position Chr4:218752955-218753032 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 55 - AAUUUUCGGCGGCCAUGGCAGAGG - 78
Stem-loop(if miRNA) --                                   AA
  AAUUUUCGGCGGCCAUGGCAGAGGCCGCCGAAAAU  C
  |||||||||||||||||||||||||||||||||||
  UUAAAAGCCGCCGGUACCGUCUCCGGCGGCUUUUA  G
CA                                   AU
Stem-loop sequence AAUUUUCGGCGGCCAUGGCAGAGGCCGCCGAAAAUAACGUAAUUUUCGGCGGCCUCUGCCAUGGCCGCCGAAAAUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT065567.1
ncRNA:24   GGAGACGGUACCGGCGGCUUUUAA   1
  ||||||*|*||||||||||||||*
targets:1104   CCUCUGACCUGGCCGCCGAAAAUA   1127

3.0 Zea mays full-length cDNA clone ZM_BFb0298D06 mRNA, complete cds NA coding protein psRNATarget
XM_020541736.1
ncRNA:24   GGA--GACGGUACCGGCGGCUUUUAA   1
  *||--|||=|**||||||||||||||
targets:73   GCUACCUGUCUCGGCCGCCGAAAAUU   98

3.0 PREDICTED: Zea mays proline-rich protein HaeIII subfamily 1-like (LOC109941206), mRNA NA coding protein psRNATarget