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BaseInfo

ncRNA ID	novel_zma_miR9455
Species	Zea mays
Class	miRNA
Genome position	Chr6:39559533-39559648 [+]
Reference genome	RefGen_v4
Source	SRR4237224
Length	24
Mature sequence(if miRNA)	93 - ACACUCGACAAAGGCUUUACCGAG - 116
Stem-loop(if miRNA)	--   C                 --- - -    A   U            GAACCCUUU   CGG AAAGUCUUUGUCGAGUG   C C CGAA AAA GUACUCGGCAAA         G   ||| |||||||||||||||||   | | |||| ||| ||||||||||||         C   GCC UUUCGGAAACAGCUCAC   G G GCUU UUU UAUGAGCUGUUU         C GA   A                 AAU U A    G   U            AUAAAAUAA
Stem-loop sequence	CGGCAAAGUCUUUGUCGAGUGCCCGAAAAAAUGUACUCGGCAAAGAACCCUUUGCCAAUAAAAUAUUUGUCGAGUAUUUUUGUUCGAGUGUAACACUCGACAAAGGCUUUACCGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ113387.1	ncRNA:24   GAGCCAUUUCGGAAACAGCUCACA   1   |||*|||||||*|||||||||||| targets:35   CUCAGUAAAGCAUUUGUCGAGUGU   58 Target Full Sequence	1.5	TSA: Zea mays contig49048, mRNA sequence	NA	coding protein	psRNATarget
EU956562.1	ncRNA:24   GAGCCAUUUCGGAAACAGCUC-ACA   1   *****||||||||||||||||-||| targets:1383   GCAACUAAAGCCUUUGUCGAGAUGU   1407 Target Full Sequence	3.0	Zea mays clone 1566255 mRNA sequence	NA	coding protein	psRNATarget
XM_008679914.1	ncRNA:24   GAGCCAUUUCGGAAACAGCUC-ACA   1   *****||||||||||||||||-||| targets:1430   GCAACUAAAGCCUUUGUCGAGAUGU   1454 Target Full Sequence	3.0	PREDICTED: Zea mays putative pentatricopeptide repeat-containing protein At5g52630 (LOC103652922), mRNA	NA	coding protein	psRNATarget