ncRNA ID | osa-miRf10541-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - UCAGCGCCAAAUACAUUGGCGCUGA - NA |
Stem-loop(if miRNA) |
  G          AUA A            --CCCU       C   UCUCGCCCGCCACGCUGGCG GG UCAGCGCCAA   C UUGGCGCUGAGG      GCCACGU GCG                    C || ||||||||||   | ||||||||||||      ||||||| |||                    G CC AGUCGCGGUU   G AACCGCGACUCC      UAUAGUC GCG                    A   G          GGA A            AACAAG       -   GUUACCCUGACCGCGACUGU |
Stem-loop sequence | GGGUCAGCGCCAAAUACAUUGGCGCUGAGGCCCUGCCACGUCGCGUCUCGCCCGCCACGCUGGCGCGAUGUCAGCGCCAGUCCCAUUGGCGCUGAUAUGAACAACCUCAGCGCCAAAGAGGUUGGCGCUGAGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288785.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090069K17, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015783144.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group YTH domain-containing protein 1-like (LOC107280970), mRNA | YTH domain-containing protein 1-like(LOC107280970) | coding protein | psRNATarget | |||||||||
AK288269.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090016O06, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK100220.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:J023046M01, full insert sequence | NA | coding protein | psRNATarget |