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BaseInfo

ncRNA ID osa-miRf10541-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - UCAGCGCCAAAUACAUUGGCGCUGA - NA
Stem-loop(if miRNA)   G          AUA A            --CCCU       C   UCUCGCCCGCCACGCUGGCG
GG UCAGCGCCAA   C UUGGCGCUGAGG      GCCACGU GCG                    C
|| ||||||||||   | ||||||||||||      ||||||| |||                    G
CC AGUCGCGGUU   G AACCGCGACUCC      UAUAGUC GCG                    A
  G          GGA A            AACAAG       -   GUUACCCUGACCGCGACUGU
Stem-loop sequence GGGUCAGCGCCAAAUACAUUGGCGCUGAGGCCCUGCCACGUCGCGUCUCGCCCGCCACGCUGGCGCGAUGUCAGCGCCAGUCCCAUUGGCGCUGAUAUGAACAACCUCAGCGCCAAAGAGGUUGGCGCUGAGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288785.1
ncRNA:25   AGUCGCGGUUACAUAAACCGCGACU   1
  |||||||||||||=|||||||||||
targets:702   UCAGCGCCAAUGUGUUUGGCGCUGA   726

1.5 Oryza sativa Japonica Group cDNA, clone: J090069K17, full insert sequence NA coding protein psRNATarget
XM_015783144.1
ncRNA:25   AGUCGCGGUUACAUAAACCGCGACU   1
  |||||||||||||=|||||||||||
targets:1579   UCAGCGCCAAUGUGUUUGGCGCUGA   1603

1.5 PREDICTED: Oryza sativa Japonica Group YTH domain-containing protein 1-like (LOC107280970), mRNA YTH domain-containing protein 1-like(LOC107280970) coding protein psRNATarget
AK288269.1
ncRNA:25   AGUCGCGGUUACAUAAACCGCGACU   1
  |||*|||=|||||||||||||||||
targets:2070   UCAACGCUAAUGUAUUUGGCGCUGA   2094

1.0 Oryza sativa Japonica Group cDNA, clone: J090016O06, full insert sequence NA coding protein psRNATarget
AK100220.1
ncRNA:25   AGUCGCGGUUACAUAAACCGCGACU   1
  ||||||||||**|||||||||||||
targets:1379   UCAGCGCCAACCUAUUUGGCGCUGA   1403

2.0 Oryza sativa Japonica Group cDNA clone:J023046M01, full insert sequence NA coding protein psRNATarget