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BaseInfo

ncRNA ID novel_zma_miR9439
Species Zea mays
Class miRNA
Genome position Chr5:89562064-89562127 [+]
Reference genome RefGen_v4
Source SRR4237223;SRR4237225
Length 22
Mature sequence(if miRNA) 1 - GACCACUUCGUUUGUACGACUG - 22
Stem-loop(if miRNA) --       -   UUU   -     -- -G    G
  GACCACU UCG   GUA CGACU  G  GCCG U
  ||||||| |||   ||| |||||  |  ||||
  CUGGUGA GGC   CGU GUUGG  C  CGGU G
CC       U   -UU   A     UG AG    A
Stem-loop sequence GACCACUUCGUUUGUACGACUGGGCCGGUGAUGGCGACGUGGUUGAUGCUUCGGUAGUGGUCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952163.1
ncRNA:22   GUCAGCAUGUUUGCUUCACCAG   1
  ||||*||||||||*||||||||
targets:1387   CAGUGGUACAAACAAAGUGGUC   1408

2.5 Zea mays clone 1213939 mRNA sequence NA coding protein psRNATarget