Search result

BaseInfo

ncRNA ID novel_zma_miR9436
Species Zea mays
Class miRNA
Genome position Chr5:38079936-38079981 [-]
Reference genome RefGen_v4
Source SRR4237223
Length 21
Mature sequence(if miRNA) 26 - UCGAACCCGAAUAGACCGAAU - 46
Stem-loop(if miRNA) --    --               A
  UCGA  ACCCGAAUAGACCGA U
  ||||  |||||||||||||||
  GGCU  UGGGCUUAUCUGGCU U
UG    UU               A
Stem-loop sequence UCGAACCCGAAUAGACCGAAUUAUCGGUCUAUUCGGGUUUUCGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020544549.1
ncRNA:21   UAAGCCAGAUAAGCCCAAGCU   1
  ||||||||||||||||||||=
targets:906   AUUCGGUCUAUUCGGGUUCGG   926

1.0 PREDICTED: Zea mays uncharacterized LOC109942488 (LOC109942488), mRNA NA coding protein psRNATarget
XM_020543912.1
ncRNA:21   UAAGCCAGAUAAGCCCAAGCU   1
  |||||*||||||||||||||=
targets:1682   AUUCGAUCUAUUCGGGUUCGG   1702

2.0 PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA NA coding protein psRNATarget