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BaseInfo

ncRNA ID novel_zma_miR9435
Species Zea mays
Class miRNA
Genome position Chr5:57724079-57724165 [-]
Reference genome RefGen_v4
Source SRR4237223;SRR5100248
Length 21
Mature sequence(if miRNA) 1 - UCCUCAACCCCCUCCAUUACC - 21
Stem-loop(if miRNA) UAA      ---U          G       CU           A
   UAGUGG    GGUUGAGGGG CCAAAAU  CUUGCUAUUCA U
   ||||||    |||||||||| |||||||  |||||||||||
   AUUACC    CCAACUCCUC GGUUUUA  GAACGAUAAGU U
-CC      UCCC          -       AG           U
Stem-loop sequence UAAUAGUGGUGGUUGAGGGGGCCAAAAUCUCUUGCUAUUCAAUUUUGAAUAGCAAGGAAUUUUGGCUCCUCAACCCCCUCCAUUACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ054947.1
ncRNA:21   CCAUUACCUCCCCCAACUCCU   1
  *||||||||||||*||||||=
targets:8   AGUAAUGGAGGGGAUUGAGGG   28

2.5 TSA: Zea mays contig56069, mRNA sequence NA coding protein psRNATarget