ncRNA ID | novel_zma_miR9428 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:142763339-142763407 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237223 |
Length | 24 |
Mature sequence(if miRNA) | 46 - AACUGGAACAGAACGACUCCGUUC - 69 |
Stem-loop(if miRNA) |
--UU      A   C          CU    AAC     GGAGUC UUC GUUCUAGUUU  UUGU   C     |||||| ||| ||||||||||  ||||   A     CCUCAG AAG CAAGGUCAAA  AACG   A CUUG      C   A          AC    ACA |
Stem-loop sequence | UUGGAGUCAUUCCGUUCUAGUUUCUUUGUAACCAAACAGCAACAAAACUGGAACAGAACGACUCCGUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT087211.1 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0001A11 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_020542520.1 |
|
2.0 | PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 38 (LOC100502147), transcript variant X2, mRNA | NA | coding protein | psRNATarget |