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BaseInfo

ncRNA ID	novel_zma_miR9426
Species	Zea mays
Class	miRNA
Genome position	Chr5:217627832-217627908 [+]
Reference genome	RefGen_v4
Source	SRR4237223
Length	21
Mature sequence(if miRNA)	57 - AGCCCCUCCAACCCCCUCCGG - 77
Stem-loop(if miRNA)	--       A   A            - CC      AAA   GGAGGGG UUG AGGGGCUAAAAU C  CUUAUU   A   ||||||| ||| |||||||||||| |  ||||||   CCUCCCC AAC UCCCCGAUUUUA G  GAAUAA   A GG       C   C            A AA      AUA
Stem-loop sequence	GGAGGGGAUUGAAGGGGCUAAAAUCCCCUUAUUAAAAAAUAAAUAAGAAGAAUUUUAGCCCCUCCAACCCCCUCCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664337.2	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   ||||||||||||||||||||| targets:2030   CCGGAGGGGGUUGGAGGGGCU   2050 Target Full Sequence	0.0	PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA	NA	coding protein	psRNATarget
EU944975.1	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   ||||||*||*||||||||||| targets:745   CCGGAGUGGAUUGGAGGGGCU   765 Target Full Sequence	2.5	Zea mays clone 236700 mRNA sequence	NA	coding protein	psRNATarget
BT065170.1	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   ||*|||||||||||||||*|| targets:622   CCAGAGGGGGUUGGAGGGACU   642 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0017F16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008670893.2	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   ||*|||||||||||||||*|| targets:1502   CCAGAGGGGGUUGGAGGGACU   1522 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008670890.2	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   ||*|||||||||||||||*|| targets:1522   CCAGAGGGGGUUGGAGGGACU   1542 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008670892.2	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   ||*|||||||||||||||*|| targets:1546   CCAGAGGGGGUUGGAGGGACU   1566 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008670891.2	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   ||*|||||||||||||||*|| targets:1579   CCAGAGGGGGUUGGAGGGACU   1599 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020550478.1	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   ||||||*||*||||||||||| targets:2102   CCGGAGAGGAUUGGAGGGGCU   2122 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103651221 (LOC103651221), mRNA	NA	coding protein	psRNATarget
XM_020543912.1	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   |||*|||||*||||||||||| targets:4065   CCGAAGGGGAUUGGAGGGGCU   4085 Target Full Sequence	2.5	PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA	NA	coding protein	psRNATarget
LQ238903.1	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   *|*||||||*||||||||||| targets:8   ACUGAGGGGAUUGGAGGGGCU   28 Target Full Sequence	2.5	Sequence 4898 from Patent EP2985353	NA	coding protein	psRNATarget
JB167234.1	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   *|*||||||*||||||||||| targets:8   ACUGAGGGGAUUGGAGGGGCU   28 Target Full Sequence	2.5	Sequence 4898 from Patent EP2559767	NA	coding protein	psRNATarget
HI406773.1	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   *|*||||||*||||||||||| targets:8   ACUGAGGGGAUUGGAGGGGCU   28 Target Full Sequence	2.5	Sequence 4898 from Patent EP2074227	NA	coding protein	psRNATarget
AY109096.1	ncRNA:21   GGCCUCCCCCAACCUCCCCGA   1   *|*||||||*||||||||||| targets:2214   ACUGAGGGGAUUGGAGGGGCU   2234 Target Full Sequence	2.5	Zea mays PCO119715 mRNA sequence	NA	coding protein	psRNATarget