Search result

BaseInfo

ncRNA ID novel_zma_miR9406
Species Zea mays
Class miRNA
Genome position Chr4:210652846-210653016 [+]
Reference genome RefGen_v4
Source SRR4237223
Length 22
Mature sequence(if miRNA) 150 - CAUAAACACGAACUCUGUCGGU - 171
Stem-loop(if miRNA) --    -   GC                -      G  G   GAAA      C           GC           C    GCCU
  CGAC GAG  CGUGUUUAUGACAAGA CAUGUG UC UGC    UUUCGG AGCAUAACCCC  UGUUCUCCAAU GCAC    A
  |||| |||  |||||||||||||||| |||||| || |||    |||||| |||||||||||  ||||||||||| ||||    A
  GCUG CUC  GCACAAAUACUGUUUU GUACAC AG ACG    AAAGCC UCGUAUUGGGG  ACAAGAGGUUA CGUG    A
UG    U   AA                C      G  G   AAUC      U           AU           A    GUAA
Stem-loop sequence CGACGAGGCCGUGUUUAUGACAAGACAUGUGGUCGUGCGAAAUUUCGGCAGCAUAACCCCGCUGUUCUCCAAUCGCACGCCUAAAAAUGGUGCAAUUGGAGAACAUAGGGGUUAUGCUUCCGAAACUAAGCAGGAGCACAUGCUUUUGUCAUAAACACGAACUCUGUCGGU