ncRNA ID | novel_zma_miR9401 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:16087423-16087619 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997865 |
Length | 24 |
Mature sequence(if miRNA) | 174 - AGUCAACAUCGUCAUAUAUUUAAG - 197 |
Stem-loop(if miRNA) |
--             UC             A    -A          C               AAUCA    UUAUCAUUUGUUUUAUCACUUAAGGUAG   UAAAUAUAUGACG  GUUGACUUUUUUU AAAA  UUUGACUACU GUCUUAUUUAAAAUA     UGAG                            U   |||||||||||||  ||||||||||||| ||||  |||||||||| |||||||||||||||     ||||                            U   AUUUAUAUACUGC  CAACUGAAAAAAA UUUU  AAACUGGUGA CAGAAUAAGUUUUAU     AUAA                            U GA             UA             G    CG          A               ---GA    GCUUUUAUAUUUUAAAAUUCGGUAUGAG |
Stem-loop sequence | UAAAUAUAUGACGUCGUUGACUUUUUUUAAAAAAUUUGACUACUCGUCUUAUUUAAAAUAAAUCAUGAGUUAUCAUUUGUUUUAUCACUUAAGGUAGUUUGAGUAUGGCUUAAAAUUUUAUAUUUUCGAAUAAGUAUUUUGAAUAAGACAAGUGGUCAAAGCUUUUGAAAAAAAGUCAACAUCGUCAUAUAUUUAAG |