Search result

BaseInfo

ncRNA ID novel_zma_miR9401
Species Zea mays
Class miRNA
Genome position Chr4:16087423-16087619 [+]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 174 - AGUCAACAUCGUCAUAUAUUUAAG - 197
Stem-loop(if miRNA) --             UC             A    -A          C               AAUCA    UUAUCAUUUGUUUUAUCACUUAAGGUAG
  UAAAUAUAUGACG  GUUGACUUUUUUU AAAA  UUUGACUACU GUCUUAUUUAAAAUA     UGAG                            U
  |||||||||||||  ||||||||||||| ||||  |||||||||| |||||||||||||||     ||||                            U
  AUUUAUAUACUGC  CAACUGAAAAAAA UUUU  AAACUGGUGA CAGAAUAAGUUUUAU     AUAA                            U
GA             UA             G    CG          A               ---GA    GCUUUUAUAUUUUAAAAUUCGGUAUGAG
Stem-loop sequence UAAAUAUAUGACGUCGUUGACUUUUUUUAAAAAAUUUGACUACUCGUCUUAUUUAAAAUAAAUCAUGAGUUAUCAUUUGUUUUAUCACUUAAGGUAGUUUGAGUAUGGCUUAAAAUUUUAUAUUUUCGAAUAAGUAUUUUGAAUAAGACAAGUGGUCAAAGCUUUUGAAAAAAAGUCAACAUCGUCAUAUAUUUAAG