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BaseInfo

ncRNA ID	novel_zma_miR9394
Species	Zea mays
Class	miRNA
Genome position	Chr3:9223005-9223130 [-]
Reference genome	RefGen_v4
Source	SRR4237223
Length	21
Mature sequence(if miRNA)	1 - UUUCGGGCUCCCAAACUAGCC - 21
Stem-loop(if miRNA)	--                       G  GA  GUU              C    A   U   A   CUAGUUUGGGAGCCCGAAAAUCG AG  GA   GAGGGGCUAAAAUC UCUU UUA UCA A   ||||||||||||||||||||||| ||  ||   |||||||||||||| |||| ||| |||   GAUCAAACCCUCGGGCUUUUAGC UC  CU   CUCCCUGAUUUUAG AGAA AAU AGU U CC                       A  AC  AAC              A    G   U   U
Stem-loop sequence	CUAGUUUGGGAGCCCGAAAAUCGGAGGAGAGUUGAGGGGCUAAAAUCCUCUUAUUAUUCAAAUUUGAUUAAGAAGAAGAUUUUAGUCCCUCCAAUCCACUACGAUUUUCGGGCUCCCAAACUAGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008674728.2	ncRNA:21   CCGAUCAAACCCUCGGGCUUU   1   ||||||||||||||||||||| targets:618   GGCUAGUUUGGGAGCCCGAAA   638 Target Full Sequence	0.0	PREDICTED: Zea mays 60S ribosomal protein L18A (LOC100284168), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ074100.1	ncRNA:21   CCGAUCAAACCCUCGGGCUUU   1   ||||||||||||||||*|||| targets:134   GGCUAGUUUGGGAGCCAGAAA   154 Target Full Sequence	1.5	TSA: Zea mays contig09737, mRNA sequence	NA	coding protein	psRNATarget
BT018904.1	ncRNA:21   CCGAUCAAACCCUCGGGCUUU   1   |||||||*|||||||||*||| targets:1706   GGCUAGUCUGGGAGCCCCAAA   1726 Target Full Sequence	2.5	Zea mays clone EL01T0208E01.d mRNA sequence	NA	coding protein	psRNATarget