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BaseInfo

ncRNA ID novel_zma_miR9387
Species Zea mays
Class miRNA
Genome position Chr3:91329683-91329730 [-]
Reference genome RefGen_v4
Source SRR4237223;SRR4237224;SRR5099742
Length 22
Mature sequence(if miRNA) 1 - AACCGUGAGCACUACUGACAUA - 22
Stem-loop(if miRNA) --UA     G  G     -     C
    UCAGU AG GUUCA GGUUG U
    ||||| || ||||| |||||
    AGUCA UC CGAGU CCAAU C
AUAC     -  A     G     U
Stem-loop sequence UAUCAGUGAGGGUUCAGGUUGCUCUUAACCGUGAGCACUACUGACAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU968197.1
ncRNA:22   AUACAGUCAUCACGAGUGCCAA   1
  |||*|||||*||||||||||||
targets:617   UAUAUCAGUCGUGCUCACGGUU   638

2.5 Zea mays clone 316521 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU954721.1
ncRNA:22   AUACAGUCAUCACGAGUGCCAA   1
  |||*|||||*||||||||||||
targets:753   UAUAUCAGUCGUGCUCACGGUU   774

2.5 Zea mays clone 1478970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget