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BaseInfo

ncRNA ID novel_zma_miR9377
Species Zea mays
Class miRNA
Genome position Chr3:233630201-233630301 [-]
Reference genome RefGen_v4
Source SRR4237223
Length 24
Mature sequence(if miRNA) 1 - AUCAAGGGGAGCACUGUAGCGCCC - 24
Stem-loop(if miRNA) --         -C      -A    AA      CA   -    C  -UCU  A
  GCGUUGCAG  CUCCCC  GAUC  GGGGAG  UGC GCGC GG    CC A
  |||||||||  ||||||  ||||  ||||||  ||| |||| ||    ||
  CGCGAUGUC  GAGGGG  CUAG  CCCCUC  ACG CGCG UC    GG A
CC         AC      AA    -A      CG   U    U  UCUU  U
Stem-loop sequence GCGUUGCAGCCUCCCCAGAUCAAGGGGAGCAUGCGCGCCGGUCUCCAAAUGGUUCUCUUGCGCUGCAGCCUCCCCAGAUCAAGGGGAGCACUGUAGCGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008658673.2
ncRNA:24   CCCGCGAUGUCACGAGGGGAACUA   1
  |||=|||||||||||=||||||||
targets:2341   GGGUGCUACAGUGCUUCCCUUGAU   2364

1.5 PREDICTED: Zea mays tafazzin homolog (LOC103636321), mRNA NA coding protein psRNATarget