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BaseInfo

ncRNA ID	novel_zma_miR9367
Species	Zea mays
Class	miRNA
Genome position	Chr2:41695531-41695642 [-]
Reference genome	RefGen_v4
Source	SRR4237223
Length	23
Mature sequence(if miRNA)	1 - AAGAAUAUGGCACUUGGCAAAGA - 23
Stem-loop(if miRNA)	--UUC         UU      --A     G     -UUG  U              A      GCCGAGUGU  UAUUUU   CCGAG GUUUU    CG GGCACUCGGCAAAG G      |||||||||  ||||||   ||||| |||||    || ||||||||||||||      CGGUUCACG  AUAAGA   GGCUC CAAAA    GC CCGUGAGCCGUUUC C AGAAA         GU      AAC     A     UAAA  -              U
Stem-loop sequence	UUCGCCGAGUGUUUUAUUUUACCGAGGGUUUUUUGCGUGGCACUCGGCAAAGAGCUCUUUGCCGAGUGCCCGAAAUAAAACACUCGGCAAAGAAUAUGGCACUUGGCAAAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT042352.1	ncRNA:23   AGAAACGGUUCACGGUAUAAGAA   1   ||||||||=||||=||||||||| targets:1206   UCUUUGCCGAGUGUCAUAUUCUU   1228 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0207J05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148473.2	ncRNA:23   AGAAACGGUUCACGGUAUAAGAA   1   ||||||||=||||=||||||||| targets:1256   UCUUUGCCGAGUGUCAUAUUCUU   1278 Target Full Sequence	2.5	Zea mays Protein CHLORORESPIRATORY REDUCTION 6 chloroplastic (si707021b11), mRNA	NA	coding protein	psRNATarget
XM_020543621.1	ncRNA:23   AGAAACGGUUCACGGUAUAAGAA   1   |||||||==|||||||||||||| targets:3599   UCUUUGCUGAGUGCCAUAUUCUU   3621 Target Full Sequence	2.0	PREDICTED: Zea mays ethylene insensitive-like1 (umc1357), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008654633.2	ncRNA:23   AGAAACGGUUCACGGUAUAAGAA   1   |*|||*|||*||||||||||||| targets:1222   UAUUUACCAUGUGCCAUAUUCUU   1244 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103632921 (LOC103632921), mRNA	NA	coding protein	psRNATarget
XM_008654522.2	ncRNA:23   AGAAACGGUUCACGGUAUAAGAA   1   |*|||*|||*||||||||||||| targets:1166   UAUUUACCAUGUGCCAUAUUCUU   1188 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103632787 (LOC103632787), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008654517.2	ncRNA:23   AGAAACGGUUCACGGUAUAAGAA   1   |*|||*|||*||||||||||||| targets:1224   UAUUUACCAUGUGCCAUAUUCUU   1246 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103632787 (LOC103632787), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020540952.1	ncRNA:23   AGAAACGGUUCACGGUAUAAGAA   1   |*|||*|||*||||||||||||| targets:3010   UAUUUACCAUGUGCCAUAUUCUU   3032 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103632787 (LOC103632787), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020540951.1	ncRNA:23   AGAAACGGUUCACGGUAUAAGAA   1   |*|||*|||*||||||||||||| targets:4867   UAUUUACCAUGUGCCAUAUUCUU   4889 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103632787 (LOC103632787), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020540950.1	ncRNA:23   AGAAACGGUUCACGGUAUAAGAA   1   |*|||*|||*||||||||||||| targets:4751   UAUUUACCAUGUGCCAUAUUCUU   4773 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103632787 (LOC103632787), transcript variant X1, mRNA	NA	coding protein	psRNATarget