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BaseInfo

ncRNA ID novel_zma_miR9361
Species Zea mays
Class miRNA
Genome position Chr2:184642642-184642689 [-]
Reference genome RefGen_v4
Source SRR4237223
Length 21
Mature sequence(if miRNA) 1 - AGAAUAGAACCGCUCCAUUCU - 21
Stem-loop(if miRNA) --      A A          AAU
  AAUGGA C GUUCUAUUCU   U
  |||||| | ||||||||||
  UUACCU G CAAGAUAAGA   U
UC      C C          AUC
Stem-loop sequence AAUGGAACAGUUCUAUUCUAAUUUCUAAGAAUAGAACCGCUCCAUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001154403.2
ncRNA:21   UCUUACCUCGCCAAGAUAAGA   1
  |||||*|||=|||||||||||
targets:2245   AGAAUAGAGUGGUUCUAUUCU   2265

2.5 Zea mays Asparaginyl-tRNA synthetase, cytoplasmic 3 (pco123869), mRNA NA coding protein psRNATarget
EU956856.1
ncRNA:21   UCUUACCUCGCCAAGAUAAGA   1
  |||||*|||=|||||||||||
targets:2246   AGAAUAGAGUGGUUCUAUUCU   2266

2.5 Zea mays clone 1575904 asparaginyl-tRNA synthetase, cytoplasmic 3 mRNA, complete cds NA coding protein psRNATarget
XM_020541217.1
ncRNA:21   UCUUACCUCGCCAAGAUAAGA   1
  *|||||||*|||||||||||*
targets:2225   UGAAUGGAACGGUUCUAUUCA   2245

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At2g22070-like (LOC103631956), mRNA NA coding protein psRNATarget