ncRNA ID | osa-miRf10533-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - ACCGGCCGUGCAAUGCCGGU - NA |
Stem-loop(if miRNA) |
    A      ACAC   AU       A   CACCC  UC     --    A       CAU GGUC GACCGG    GCA  GCCGGUC GAC     UG  UGCCC  GGUC GACCGGC   G |||| ||||||    |||  ||||||| |||     ||  |||||  |||| ||||||| CCAG CUGGCC    CGU  CGGCCAG CUG     AC  AUGGG  CCAG UUGGCCG   C     A      GUAA   GC       A   --ACC  -C     CG    A       AGA |
Stem-loop sequence | GGUCAGACCGGACACGCAAUGCCGGUCAGACCACCCUGUCUGCCCGGUCAGACCGGCCAUGCAGAGCCGGUUAGACCGCGGGUACCACCAGUCAGACCGGCCGUGCAAUGCCGGUCAGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK110866.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-172-E01, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015785582.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group non-structural maintenance of chromosomes element 4 homolog A (LOC4341536), mRNA | non-structural maintenance of chromosomes element 4 homolog A(LOC4341536) | coding protein | psRNATarget |