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BaseInfo

ncRNA ID osa-miRf10533-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - ACCGGCCGUGCAAUGCCGGU - NA
Stem-loop(if miRNA)     A      ACAC   AU       A   CACCC  UC     --    A       CAU
GGUC GACCGG    GCA  GCCGGUC GAC     UG  UGCCC  GGUC GACCGGC   G
|||| ||||||    |||  ||||||| |||     ||  |||||  |||| |||||||
CCAG CUGGCC    CGU  CGGCCAG CUG     AC  AUGGG  CCAG UUGGCCG   C
    A      GUAA   GC       A   --ACC  -C     CG    A       AGA
Stem-loop sequence GGUCAGACCGGACACGCAAUGCCGGUCAGACCACCCUGUCUGCCCGGUCAGACCGGCCAUGCAGAGCCGGUUAGACCGCGGGUACCACCAGUCAGACCGGCCGUGCAAUGCCGGUCAGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK110866.1
ncRNA:20   UGGCCGUAACGUGCCGGCCA   1
  |*|||||||||||||||*||
targets:1432   AGCGGCAUUGCACGGCCCGU   1451

2.5 Oryza sativa Japonica Group cDNA clone:002-172-E01, full insert sequence NA coding protein psRNATarget
XM_015785582.1
ncRNA:20   UGGCCGUAACGUGCCGGCCA   1
  |*|||||||||||||||*||
targets:1432   AGCGGCAUUGCACGGCCCGU   1451

2.5 PREDICTED: Oryza sativa Japonica Group non-structural maintenance of chromosomes element 4 homolog A (LOC4341536), mRNA non-structural maintenance of chromosomes element 4 homolog A(LOC4341536) coding protein psRNATarget