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BaseInfo

ncRNA ID	novel_zma_miR9348
Species	Zea mays
Class	miRNA
Genome position	Chr1:2464978-2465071 [-]
Reference genome	RefGen_v4
Source	SRR4237223
Length	24
Mature sequence(if miRNA)	1 - AGGAACCGCCUGUAGAAAUACAAU - 24
Stem-loop(if miRNA)	---CG                          UU   CAC              AUUUCUACAGGCGGUUCCUUAAGAAA  CGC   UAGAAAUCA      ||||||||||||||||||||||||||  |||   ||||||||U      UAAAGAUGUCCGCCAAGGAAUUCUUU  GCG   AUUUUUAGG UAACA                          UG   AAC
Stem-loop sequence	CGAUUUCUACAGGCGGUUCCUUAAGAAAUUCGCCACUAGAAAUCAUGGAUUUUUACAAGCGGUUUUCUUAAGGAACCGCCUGUAGAAAUACAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU943186.1	ncRNA:24   UAAC-AUAAAGAUGUCCGCCAAGGA   1   ||||-|||||||||||||||||=|| targets:1917   AUUGCUAUUUCUACAGGCGGUUUCU   1941 Target Full Sequence	1.5	Zea mays clone 1582065 mRNA sequence	NA	coding protein	psRNATarget
HI402984.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||**|||||||||||||||||||| targets:31   AUCAUAUUUCUACAGGCGGUUCCU   54 Target Full Sequence	0.0	Sequence 1109 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235114.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||**|||||||||||||||||||| targets:31   AUCAUAUUUCUACAGGCGGUUCCU   54 Target Full Sequence	0.0	Sequence 1109 from Patent EP2985353	NA	coding protein	psRNATarget
JB163445.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||**|||||||||||||||||||| targets:31   AUCAUAUUUCUACAGGCGGUUCCU   54 Target Full Sequence	0.0	Sequence 1109 from Patent EP2559767	NA	coding protein	psRNATarget
JB163558.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||||-|||||||||*||||||||| targets:49   AUUG-AUUUCUACAUGCGGUUCCU   71 Target Full Sequence	1.5	Sequence 1222 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235227.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||||-|||||||||*||||||||| targets:49   AUUG-AUUUCUACAUGCGGUUCCU   71 Target Full Sequence	1.5	Sequence 1222 from Patent EP2985353	NA	coding protein	psRNATarget
HI403097.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||||-|||||||||*||||||||| targets:49   AUUG-AUUUCUACAUGCGGUUCCU   71 Target Full Sequence	1.5	Sequence 1222 from Patent EP2074227	NA	coding protein	psRNATarget
HI402986.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||*||||||=||*||||||||||| targets:31   AUCGUAUUUUUAGAGGCGGUUCCU   54 Target Full Sequence	2.5	Sequence 1111 from Patent EP2074227	NA	coding protein	psRNATarget
JB163447.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||*||||||=||*||||||||||| targets:31   AUCGUAUUUUUAGAGGCGGUUCCU   54 Target Full Sequence	2.5	Sequence 1111 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235116.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||*||||||=||*||||||||||| targets:31   AUCGUAUUUUUAGAGGCGGUUCCU   54 Target Full Sequence	2.5	Sequence 1111 from Patent EP2985353	NA	coding protein	psRNATarget
HI407102.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||*|-|||||||||*||||||||| targets:8   AUCG-AUUUCUACAUGCGGUUCCU   30 Target Full Sequence	1.5	Sequence 5227 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239232.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||*|-|||||||||*||||||||| targets:8   AUCG-AUUUCUACAUGCGGUUCCU   30 Target Full Sequence	1.5	Sequence 5227 from Patent EP2985353	NA	coding protein	psRNATarget
JB167563.1	ncRNA:24   UAACAUAAAGAUGUCCGCCAAGGA   1   ||*|-|||||||||*||||||||| targets:8   AUCG-AUUUCUACAUGCGGUUCCU   30 Target Full Sequence	1.5	Sequence 5227 from Patent EP2559767	NA	coding protein	psRNATarget